Research

An interdisciplinary approach across the entire coffee value chain: from gene to cup

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Ecophysiology & Biodiversity

  • Monitoring of biodiversity recovery indicators (birds, microorganisms, and native trees)

  • Analysis of genetic diversity and performance of native vegetation

 

Ecosystem services

  • Carbon sequestration assessment

  • Circular economy: production of biogas, bioenergy, and biofertilizers; wastewater treatment

  • Mushroom production

 
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Coffee

  • Monitoring of the coffee production system: implementation of good farming practices

  • Fermented coffee production

  • Characterization of endemic species


 

Publications

 

Ecological Function and Diversity of the Endosphere Microbiome in Leaves and Fruits of Coffea arabica L. Across Elevation and Shade Gradients

Chinedu C. Obieze, Inocência da Piedade E. Tapaça, Inês Graça, Gilberto V. de Melo Pereira, Fábio L. Partelli, José C. Ramalho, Isabel Marques & Ana I. Ribeiro-Barros

Environmental DNA, 2025

Integrated microbial–metabolomic analysis reveals how fermentation contributes to the unique flavor of African Arabica coffee

Gilberto V. de Melo Pereira, Alexander S. Vale, Ana I. Ribeiro-Barros, Luiz R. S. Rodrigues, Gisela M. F. B. Mirção, Bernadete Camilo, Inocência da Piedade E. Tapaça, Vitoria M. Sampaio, Satinder k. Brar & Carlos R. Soccol

Environmental DNA, 2025

 

Irradiance level and elevation shape the soil microbiome communities of Coffea arabica L.

Inocência da Piedade E. Tapaça, Chinedu C. Obieze, Gilberto V. de Melo Pereira, David Fangueiro, João Coutinho, Irene Fraga, Fábio L. Partelli, José C. Ramalho, Isabel Marques & Ana I. Ribeiro-Barros

Environmental Microbiome, 2024

 

Genomic Evaluation of Coffea arabica and Its Wild Relative Coffea racemosa in Mozambique: Settling Resilience Keys for the Coffee Crop in the Context of Climate Change

Inocência P. E. Tapaça, Lopes Mavuque, Riccardo Corti, Samuele Pedrazzani, Ivete S. A. Maquia; Castigo Tongai, Fábio L. Partelli., José C. Ramalho, Isabel Marques & Ana I. Ribeiro-Barros

Plants, 2023

 

Diversity in Coffea arabica Cultivars in the Mountains of Gorongosa National Park, Mozambique, Regarding Bean and Leaf Nutrient Accumulation and Physical Fruit Traits

Niquisse José Alberto, José C. Ramalho, Ana I. Ribeiro-Barros, Alexandre P. Viana, Cesar A. Krohling, Sional S. Moiane, Zito Alberto, Weverton P. Rodrigues & Fábio L. Partelli

Agronomy, 2023

 
 

Plant morphological and leaf anatomical traits in Coffea arabica L. cultivars cropped in Gorongosa Mountain, Mozambique

Niquisse José Alberto, Adésio Ferreira, Ana I. Ribeiro-Barros, Elisa Mitsuko Aoyama, Larícia Olária Emerick Silva, Miroslava Rakocevic, José C. Ramalho & Fábio L. Partelli

Horticulturae, 2024

 

Impact of climate changes in the suitable areas for Coffea arabica L. production in Mozambique: Agroforestry as an alternative management system to strengthen crop sustainability

Crimildo T. Cassamo, David Draper, Maria M. Romeiras, Isabel Marques, Rogério Chiulele, Marisa Rodrigues, Marc Stalmans, Fábio L. Partelli, Ana Ribeiro-Barros, José C. Ramalho

Agriculture, Ecosystems & Environment, 2023

 

Shade and Altitude Implications on the Physical and Chemical Attributes of Green Coffee Beans from Gorongosa Mountain, Mozambique

Crimildo T. Cassamo, Adilson V. J. Mangueze, António E. Leitão, Isabel P. Pais, Rita Moreira, Claudine Campa, Rogério Chiulele, Fabrício O. Reis, Isabel Marques & Paula Scotti-Campos

Agronomy, 2022